Yep, we all have thousands of thoughts a day. In fact, if you ever really pay attention, you'll notice that we are constantly talking to ourselves in the form of a conscious stream of thought that we can't stop. "Where did I put my keys? I just had them this morning and I always put them in the drawer with my wallet..... Oh, there they are! Why are they on the table? I don't remember putting them there."
Who are we talking to? Are we telling ourselves what we already know?
"I have a few thoughts a day that I decide to take action on... is that not free will?"
A thought to do something, and then a counter thought that results in you not taking action, is still all based on thoughts that you didn't consciously create. We aren't able to sit outside of our stream of thought. Thoughts/counter thoughts just arise in consciousness and we take, or don't take, action based on those thoughts. There is no separate "self" that is able to think our thoughts before we think them.